EMBL file parser is not parsing features #923

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1. josemduarte

   added

   enhancementImprovement of existing code or methodImprovement of existing code or method

   help wantedQuestions and support for usersQuestions and support for users

   on Mar 10, 2021
2. richarda23 commented on Aug 14, 2021

   

   richarda23

   on Aug 14, 2021

   Last edited by richarda23

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   There is some existing code to parse features from Genbank files-

   public class GenericInsdcHeaderForat<S extends AbstractSequence<C>, C extends Compound> {

   • it should be reusable or at least help with parsing EMBL feature format based on the spec here https://www.insdc.org/documents/feature-table#3.1.
3. esmat-hejazi commented on Jun 28, 2023

   

   esmat-hejazi

   on Jun 28, 2023

   Last edited by esmat-hejazi

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   @MaxGreil Did you find anything to parse the features of Embl File?
   The method readEMBL from the classes SeqIOTools or IOTools parses the features, but they are in legacy version.