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Add a project inventory built from uploaded SBOMs - #626
This adds an opt-in project inventory that answers "which repository uses which version of a package?". Repositories upload an SBOM of their default branch (for example syft dir:. -o cyclonedx-json in a CI job) to PUT /api/projects/{project}/sbom, and the proxy records the package versions it lists. /ui/projects lists the projects and, per project, its package versions with an outdated marker when the proxy knows a newer version. Package pages get a "Used by" section listing the projects per version, including versions the proxy hasn't cached. GET /api/projects?purl=pkg:npm/lodash@4.17.20 answers the same question for scripts.
Why: the proxy knows which packages are cached, but not who depends on them. When an advisory comes out, the question is which repositories to fix. Downloads through the proxy can't answer that (CI caches, lock files resolved elsewhere, other registries), but an SBOM from each repository can.
How:
projects.enabled, projects.token (required when enabled, ${VAR} and PROXY_PROJECTS_TOKEN supported) and projects.max_age (e.g. 90d, parsed like retention durations; empty keeps projects). Uploads and deletes use the existing requireBearerToken; reads are open like the rest of /api. Disabled, none of the routes or pages exist.
New package internal/inventory parses the SBOM with git-pkgs/sbom (CycloneDX JSON/XML, SPDX JSON/tag-value) and maps each package URL to the ecosystem name and unversioned PURL the handlers record packages under (packageurl.MakeCacheStrings), so components join packages.purl. Names are spelled the way each handler stores them: distro types (apk, deb, rpm, alpm, bsd) drop the distro namespace, NuGet IDs are lowercased, PyPI names are normalized as in PEP 503, conda becomes channel/name. A table test checks every mapped type against the name its handler passes when caching. Entries without a PURL, of a type the proxy doesn't serve, without a version, and conda entries without a channel qualifier are counted as skipped; duplicates are recorded once. The project's own package is skipped too: the root of a lock file such as package-lock.json (a lock entry that depends on others while nothing depends on it) and, with syft, the Go module its binaries were built from (syft:metadata:mainModule, compared case-insensitively). Without this, a repository listed itself as its own dependency.
Migration 020_add_projects adds projects (unique name, ref, branch, uploaded_at) and project_components (project_id, package_purl, ecosystem, name, version), indexed by (package_purl, version). An upload replaces the project's components in one transaction; the project row is upserted first, so concurrent uploads and pruning of the same project take turns.
Project names are segments of [A-Za-z0-9._-], no empty, . or .. segments, at most 255 characters. They are accepted as path segments or URL-encoded as one segment (group%2Fsub%2Frepo); the wildcard is decoded only when chi routed on the raw path, like the package routes. Bodies are capped at 32 MiB. A DELETE of a path ending in /sbom that names no project answers 400 and points to DELETE /api/projects/{project}.
The outdated marker compares versions with git-pkgs/vers using the ecosystem's scheme. Versions are taken as the SBOM spells them, so a different spelling (Composer v6.4.1 vs 6.4.1, Debian epochs) shows as "not cached" on the package page; the docs say so.
Pruning runs hourly through runExclusive.
A project's page has a delete button. It asks for the upload token and sends it to DELETE /ui/api/projects/{project}, the same handler as the API behind the same token, under /ui like the cache deletes so ingress rules for the UI cover it. The token is kept in session storage.
How tested: unit tests for SBOM mapping (a real syft CycloneDX output with npm, Composer, Go and Alpine packages, plus files and the OS without PURLs; the per-type handler name table; PyPI normalization; conda without a channel; a mixed-case Go main module), name validation and version comparison; database tests for replace semantics, lookup by package with and without version, pruning and the migration, on SQLite and Postgres; API tests for auth (missing and wrong token) on both delete routes, encoded and raw project paths, path traversal and invalid names, DELETE of the upload path, body limit and bad bodies, purl lookups; UI tests for the project page, its error case and "Used by"; and a test that the routes follow projects.enabled on the real server. Also tried by hand: uploaded the syft output, cached lodash through /npm, and checked the project and package pages. I've also run it on my own instance with syft 1.55 SBOMs of four repositories (Go, npm and PyPI) uploaded the way the CI job in the docs does.
Possible follow-up: per-project vulnerabilities. The vulnerabilities table isn't filled outside tests, so this PR doesn't show any. Matching a project's versions against OSV's affected ranges would work without it.
Open questions:
Project names and the packages they use are visible on the unauthenticated /ui and /api/projects. The docs say so and suggest restricting both at the ingress; should reads require the token instead?
Repositories upload an SBOM of their default branch, for example from
syft in CI, to PUT /api/projects/{project}/sbom. The proxy records the
package versions it lists, keyed by the same unversioned PURL the
handlers record packages under, so the inventory joins with what the
proxy has cached and the vulnerabilities it holds.
That answers which repository uses which version of a package: the new
/ui/projects pages list each project's package versions with outdated
and vulnerability markers, package pages show the projects per version,
the dashboard lists vulnerable versions in use, and
GET /api/projects?purl= does the same for scripts.
The feature is off by default. Uploads and deletes need projects.token;
an upload replaces the project's components in one transaction.
projects.max_age removes projects that stopped uploading.
A syft SBOM of a repository lists the repository itself: the module in
go.mod and the root of package-lock.json, both without a version or with
the version from package.json, and the module its Go binaries were built
from. The project page showed them as dependencies.
Entries without a version are now skipped, as are lock-file roots (lock
entries that depend on others while nothing depends on them) and modules
syft marks as a binary's main module.
The page asks for the upload token and sends it to DELETE
/api/projects/{project}, so /ui gains no unauthenticated way to delete.
The token is kept in session storage for the next delete.
The vulnerabilities table is only written by tests: nothing in the proxy
calls UpsertVulnerability, so the dashboard card, the per-project count
and the per-component markers were always empty. Remove them along with
GetComponentVulnerabilities and inventory.Affected, and keep the
outdated marker, which uses the latest version the handlers record.
FromPURL now names packages the way their handlers store them:
- NuGet IDs are lowercased, as the NuGet handler stores them.
- PyPI names are normalized as in PEP 503. The PyPI handler takes the
name from the file name, which spells "." as "_", so
pkg:pypi/zope.interface has to match the cached zope-interface.
- Conda package URLs without a channel qualifier are skipped: the conda
handler records packages as channel/name, so they can never match.
- The Go main-module check ignores case. syft keeps the module path's
case in its mainModule property, while golang package URLs are
lowercased.
A table test checks every mapped PURL type against the name its handler
passes when caching.
- GetProjectsUsingPackage no longer counts each project's components
per row; the package page only needs names and versions. The ?purl=
listing leaves component_count out accordingly.
- The delete button sends to DELETE /ui/api/projects/{project}, the same
handler as the API and still behind the token, so it sits under /ui
like the cache deletes.
- The project page answers 500 when its components can't be read,
instead of showing an empty project.
- DELETE of a path ending in /sbom that names no project answers 400
with a hint, since it's most likely the upload path.
- The upload endpoint lists JSON, XML and plain text (SPDX tag-value)
as accepted.
- The docs say that versions are compared as the SBOM spells them.
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Before getting into the details, one point about how this fits with the other git-pkgs modules. When the proxy needs something a git-pkgs library gets wrong or doesn't provide, I want it fixed in that library, tagged, and bumped here, not carried as a local version in the proxy. Otherwise we end up with two implementations that drift apart, and every other consumer of the library keeps the bug.
This applies in three places in this PR.
lockFileRoots in internal/inventory/inventory.go does the same root inference as sbom.ClassifyScope, and both get it wrong for lock files that don't list the project. With a syft SBOM of a poetry.lock, requests is a direct dependency that depends on urllib3, and it gets treated as the project's own entry and skipped. I've opened git-pkgs/sbom#23 with a repro and a proposed fix: keep the metadata.component bom-ref so a declared root can be used. Root detection should be fixed there, and the inventory should use what sbom provides instead of its own heuristic.
The case-insensitive main-module comparison works around git-pkgs/purl#53, where purl v0.1.24 lowercases Go module paths. It's fixed in git-pkgs/purl#54 but not tagged yet. Once there's a release, bump purl here and drop the strings.ToLower along with the comment about golang PURLs being lowercased. The inventory stores those lowercased PURLs in project_components, so this should land before the inventory ships, not after.
normalizePyPIName repeats the PEP 503 folding in purl.ComparisonForm(), and the NuGet lowercasing in handlerName is the same as what ComparisonForm does. Use purl for those. If mapping a PURL to the name a handler stores needs something purl doesn't have yet, add it to purl.
The same goes for code already in the proxy. internal/mirror/source.go already maps SBOM PURLs to the ecosystem and name the handlers use (handlerEcosystem, condaName), and FromPURL is a second mapping that disagrees with it: the mirror keeps the distro namespace for apk/deb/rpm (alpine/busybox) and doesn't normalize PyPI or NuGet names, while FromPURL drops the namespace and does both. There should be one helper, used by both the mirror and the inventory, with the disagreement settled and the table test covering it.
packageurl.HandlerPackage returns the ecosystem and name the handlers store
a package URL under. The mirror and the inventory both use it, which
settles where they disagreed: distribution namespaces of apk, alpm, bsd,
deb and rpm are dropped, PyPI and NuGet names use purl's comparison form,
and Maven names are group:artifact as the handler stores them, where the
mirror used group/artifact.
Merged main and moved the PURL mapping into one helper, packageurl.HandlerPackage, used by both the mirror and the inventory. Where they disagreed: distro namespaces (apk, alpm, bsd, deb, rpm) are dropped as the handlers do, PyPI and NuGet names come from ComparisonForm(), and Maven names are group:artifact. The mirror used group/artifact there, so mirrored Maven artifacts were stored under a different name than the handler uses. TestHandlerPackage covers the table, and the mirror test now checks names too.
Bumping purl to v0.2.1 on its own breaks the Swift registry keys and Go retention matching that #642 handles, so I'll merge main again once #642 is in, then bump and drop the strings.ToLower in mainModules. lockFileRoots stays until sbom#23 is fixed and tagged.
With purl v0.2.1, FullName returns a Swift package as its registry
identity, scope.name. The mirror splits namespace/name again to find
the scope or the source repository, so HandlerPackage keeps that form,
as mirrorTarget did before the two mappings were shared.
purl v0.2.1 keeps the case of Go module paths, so the inventory no
longer lowercases syft's mainModule. Module paths are case-sensitive:
github.com/azure/foo is a dependency of github.com/Azure/foo, not part
of it.
FuzzParse checks that an uploaded body never makes the inventory panic
and that every component it records has a package URL, ecosystem and
version. TestSaveProjectConcurrentUploads saves one project from eight
uploads at once and checks that each succeeds and the components of
exactly one remain.
@andrew could you tag a git-pkgs/sbom release when you get a chance? git-pkgs/sbom#25 (scope from the declared root and syft lock entries) is merged but not in v0.1.7. With it tagged I can bump sbom here and replace lockFileRoots with what sbom provides, as you asked in your review.
Bump sbom to v0.1.8 and replace lockFileRoots with sbom.Roots. Inferred
roots count as the project only when read from a lock file, so an image's
packages that nothing depends on are kept.
Thanks for tagging. Merged main and bumped sbom to v0.1.8. lockFileRoots is gone; the inventory now skips the roots from sbom.Roots(), so the poetry case from your review keeps requests (test added).
One difference to plain Roots(): when the roots aren't declared, only those read from a lock file are treated as the project. Otherwise an image SBOM would lose packages nothing depends on, such as busybox; there's a test for that too.
The projects migration is now 021_add_projects, after main's 020_add_metadata_snapshots.
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Thanks for working through the first round. The sbom bump, the purl changes and the shared HandlerPackage all look right, and moving the mirror's Maven names to group:artifact fixes mirrored Maven artifacts too, since the registries resolver only accepts that form.
One thing left, the same point as before. projectRoots and readFromLockFile in internal/inventory/inventory.go add a root rule on top of sbom.Roots(): when the roots are inferred, a root only counts as the project if its syft:package:metadataType property contains "lock". Deciding whether an inferred root is the project or just a top of the graph (busybox in an image) is something sbom should answer. sbom already reads syft's location through Package.lockFile() and keeps its lock-file tables in scope_lock.go, so it's the right place for this. Please add it there, for example as a ProjectRoots() or an extra return value from Roots(), and once that's tagged, bump sbom here and drop projectRoots and readFromLockFile.
Drop projectRoots and readFromLockFile; sbom now decides which inferred
roots are the project. sbom is on the merge commit of git-pkgs/sbom#27
until it is tagged.
Bumped sbom to the merge commit of git-pkgs/sbom#27 and dropped projectRoots and readFromLockFile; the inventory now uses doc.ProjectRoots(). sbom is on a pseudo-version (v0.1.9-0.20261104140234-f3632df60df9) because #27 isn't tagged yet. @andrew could you tag a sbom release? I'll switch to it right away.
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Walkthrough
This change adds optional project inventory. It accepts SBOM uploads, stores project package versions, exposes project APIs, removes stale projects when configured, and adds project and package usage information to the web interface.
Adds project settings and validation, package URL mapping, and parsing for supported SBOM entries. The parser deduplicates package versions and skips unsupported, unversioned, and project-owned entries.
Adds project and component tables, schema migrations, and database operations to replace project components, query project usage, delete projects, and prune projects by upload age.
Project API and retention internal/server/projects_api.go, internal/server/projects_prune*, internal/server/server.go, internal/server/projects_api_test.go, docs/swagger/*, README.md, docs/configuration.md
Adds API routes for SBOM uploads, project listing and retrieval, package usage queries, and project deletion. Upload and deletion routes require a bearer token. When a positive maximum age is configured, pruning runs immediately and then hourly.
Adds project list and detail pages, package-page project usage, and a conditional Projects navigation link. Project pages show component cache and outdated status and provide a token-authenticated delete action.
sequenceDiagram
participant Client
participant ProjectsAPIHandler
participant inventory.Parse
participant DB
Client->>ProjectsAPIHandler: Upload SBOM with bearer token
ProjectsAPIHandler->>inventory.Parse: Parse SBOM body
inventory.Parse-->>ProjectsAPIHandler: Parsed components and skipped count
ProjectsAPIHandler->>DB: Save project and components
DB-->>ProjectsAPIHandler: Save result
ProjectsAPIHandler-->>Client: Upload result or error
Loading
Suggested reviewers:andrew
Merge Risk: Low · up to 7095a
Uploaded SBOMs that name Swift packages by source repository (for example github.com/apple/swift-nio) will show those components as not cached, and the projects will be missing from the package's "Used by" list. Other behavior, including authentication, migrations and pruning, checked out. This is a bounded gap that can be fixed after merge.
Security architecture risk: Low · up to 7095a
The feature is opt-in and protects uploads and deletion. Enabling it intentionally makes repository dependency information publicly readable unless access is restricted externally. A Swift package-identity mismatch may also omit affected projects from package usage views, reducing confidence during advisory triage.
Retained concerns
Low · reliability · inferred: Source-repository Swift PURLs are stored without resolving them to the registry identities used by cached packages. Because project enrichment and package usage queries compare package keys exactly, affected uploads can be absent from a cached package’s “Used by” results and lose cache-based enrichment. This is an inferred completeness defect in the new inventory contract that can undermine advisory triage, not an established authorization vulnerability. Registry-form Swift uploads are not subject to this particular mismatch.
Security review details
Security Blast Radius
inferred — The authorization unit is the instance-wide project inventory, not an individual repository or tenant. A holder of the shared project token can replace or delete any named project. Unauthenticated readers can obtain the published inventory, but the inspected upload persistence path does not grant cache-write authority.
Security Findings and Attack Paths
inferred — The inspected API and UI routes do not establish an unauthenticated mutation path: both require bearer authentication before invoking the shared delete handler. Public inventory disclosure is an explicit opt-in contract rather than a demonstrated authentication bypass. Private deployments depend on external read-access restrictions.
Trust Boundaries and Controls
observed — Bearer verification hashes tokens before constant-time comparison. Uploaded strings cross into parameterized database operations and html/template rendering. UI deletion sends a user-entered token in the Authorization header and stores it in sessionStorage after success, placing that credential within the browser origin’s script trust boundary.
Resilience and Maintainability Implications
observed — Parsing must succeed before replacement begins, and failed persistence rolls back the replacement. Deletion removes components in the same transaction as the project. Pruning commits projects individually, so interruption can leave a partially completed sweep without requiring a partially deleted project to be accepted.
Hardening Proposals
proposed — For private inventories, apply read-access restrictions consistently to /api/projects and the entire /ui surface, including package “Used by” views. Treat this as a deployment requirement rather than relying on the mutation token to protect confidentiality.
Pre-merge checks: 4 · 1
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Docstring coverage is 33.33% which is insufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff with cyclomatic complexity of at least 2. Documenta…
Write docstrings for the functions missing them to satisfy the coverage threshold.
Passed checks: 4 passed
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Title check
The title clearly and concisely describes the primary change: adding a project inventory based on uploaded SBOMs.
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Full details: Docstring Coverage
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Docstring coverage is 33.33% which is insufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff with cyclomatic complexity of at least 2. Documentation-only edits and deletions within surviving functions are included; unchanged diff context and fully deleted functions are excluded. Analyzed 60 functions across 26 files. (1 skipped: 1 unsupported.)
Resolution
Write docstrings for the functions missing them to satisfy the coverage threshold.
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Actionable comments posted: 1
Fix comments: Fix CodeRabbit comments on this PR
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only still-valid issues, skip the rest with a brief reason, keep changes
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Inline comments:
Review comments at @internal/server/projects_ui.go:
- Line 16: Rename the row collection field in ProjectsListData so it does not
shadow Layout.Projects, then update the projects list template to use the
renamed field for project rows. Keep the shared header’s Projects navigation
check bound to the Layout.Projects configuration flag so the link remains
visible when the inventory is empty.
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andrew
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This adds an opt-in project inventory that answers "which repository uses which version of a package?". Repositories upload an SBOM of their default branch (for example
syft dir:. -o cyclonedx-jsonin a CI job) toPUT /api/projects/{project}/sbom, and the proxy records the package versions it lists./ui/projectslists the projects and, per project, its package versions with an outdated marker when the proxy knows a newer version. Package pages get a "Used by" section listing the projects per version, including versions the proxy hasn't cached.GET /api/projects?purl=pkg:npm/lodash@4.17.20answers the same question for scripts.Why: the proxy knows which packages are cached, but not who depends on them. When an advisory comes out, the question is which repositories to fix. Downloads through the proxy can't answer that (CI caches, lock files resolved elsewhere, other registries), but an SBOM from each repository can.
How:
projects.enabled,projects.token(required when enabled,${VAR}andPROXY_PROJECTS_TOKENsupported) andprojects.max_age(e.g.90d, parsed like retention durations; empty keeps projects). Uploads and deletes use the existingrequireBearerToken; reads are open like the rest of/api. Disabled, none of the routes or pages exist.internal/inventoryparses the SBOM withgit-pkgs/sbom(CycloneDX JSON/XML, SPDX JSON/tag-value) and maps each package URL to the ecosystem name and unversioned PURL the handlers record packages under (packageurl.MakeCacheStrings), so components joinpackages.purl. Names are spelled the way each handler stores them: distro types (apk,deb,rpm,alpm,bsd) drop the distro namespace, NuGet IDs are lowercased, PyPI names are normalized as in PEP 503, conda becomeschannel/name. A table test checks every mapped type against the name its handler passes when caching. Entries without a PURL, of a type the proxy doesn't serve, without a version, and conda entries without achannelqualifier are counted as skipped; duplicates are recorded once. The project's own package is skipped too: the root of a lock file such aspackage-lock.json(a lock entry that depends on others while nothing depends on it) and, with syft, the Go module its binaries were built from (syft:metadata:mainModule, compared case-insensitively). Without this, a repository listed itself as its own dependency.020_add_projectsaddsprojects(unique name, ref, branch, uploaded_at) andproject_components(project_id, package_purl, ecosystem, name, version), indexed by(package_purl, version). An upload replaces the project's components in one transaction; the project row is upserted first, so concurrent uploads and pruning of the same project take turns.[A-Za-z0-9._-], no empty,.or..segments, at most 255 characters. They are accepted as path segments or URL-encoded as one segment (group%2Fsub%2Frepo); the wildcard is decoded only when chi routed on the raw path, like the package routes. Bodies are capped at 32 MiB. A DELETE of a path ending in/sbomthat names no project answers 400 and points toDELETE /api/projects/{project}.git-pkgs/versusing the ecosystem's scheme. Versions are taken as the SBOM spells them, so a different spelling (Composerv6.4.1vs6.4.1, Debian epochs) shows as "not cached" on the package page; the docs say so.runExclusive.DELETE /ui/api/projects/{project}, the same handler as the API behind the same token, under/uilike the cache deletes so ingress rules for the UI cover it. The token is kept in session storage.How tested: unit tests for SBOM mapping (a real syft CycloneDX output with npm, Composer, Go and Alpine packages, plus files and the OS without PURLs; the per-type handler name table; PyPI normalization; conda without a channel; a mixed-case Go main module), name validation and version comparison; database tests for replace semantics, lookup by package with and without version, pruning and the migration, on SQLite and Postgres; API tests for auth (missing and wrong token) on both delete routes, encoded and raw project paths, path traversal and invalid names, DELETE of the upload path, body limit and bad bodies, purl lookups; UI tests for the project page, its error case and "Used by"; and a test that the routes follow
projects.enabledon the real server. Also tried by hand: uploaded the syft output, cachedlodashthrough/npm, and checked the project and package pages. I've also run it on my own instance with syft 1.55 SBOMs of four repositories (Go, npm and PyPI) uploaded the way the CI job in the docs does.Possible follow-up: per-project vulnerabilities. The
vulnerabilitiestable isn't filled outside tests, so this PR doesn't show any. Matching a project's versions against OSV's affected ranges would work without it.Open questions:
/uiand/api/projects. The docs say so and suggest restricting both at the ingress; should reads require the token instead?020_add_projects; Serve dated snapshots of Alpine APK indexes #622 also adds a 020, so whichever merges second needs renumbering.Summary by CodeRabbit